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Getting started

  • Introduction
  • Installation

Theory

  • Normal Mode Analysis (NMA)
  • Principal Component Analysis (PCA)
  • Kernel PCA (kPCA)
  • Incremental PCA
  • Multi-dimensional scaling (MDS)
  • t-Distributed Stochastic Neighbor Embedding (t-SNE)

Usage

  • NMA Scripts
  • PCA Scripts

Tutorials

  • NMA Tutorial
  • PCA Tutorial

pyMODE-TASK

  • pyMODE-TASK- PyMOL plugin
Mode-Task
  • Docs »
  • Search
  • Edit on GitHub

© Copyright 2017, CJ Ross, B Nizami, M Glenister, OS Amamuddy, AR Atilgan, C Atilgan and Ö Tastan Bishop. Revision cf7e9c00.

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